Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRRSLHAAAVLLLVILKEQPSSPAPVNGSKWTYFGPDGENSWSKKYP---SCGGLLQSPIDLHSDILQYDASLTPLEFQGYNLSANKQF-LLTNNGHSVKLNLPSDMHIQGLQSRYSATQLHLHWGNPNDPHGSEHTVSGQHFAAELHIVHYNSDLYPDASTASNKSEGLAVLAVLIEMGSFNPSYDKIFSHLQHVKYKGQEAFVPGFNIEELLPERTAEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPREMINNFRQVQKFDERLVYTSFSQVQVCTAAGLSLGIILSLALAGILGICIVVVVSIWLFRRKSIKKGDNKGVIYKPATKMETEAHA |
| 4G7A Chain:A ((25-248)) | ------------------------------EWSYEGEKGPEHWAQLKPEFFWCKLKNQSPINIDKK-YKVKANLPKLNLY-YKTA---KESEVVNNGHTIQINIKEDNTLNYLGEKYQLKQFHFHT-------PSEHTIEKKSYPLEIHFVHKTED------------GKILVVGVMAKLGKTNKELDKILNVAPAE--EGEKILDKNLNLNNLIPKD-KRYMTYSGSLTTPPCTEGVRWIVLKKPISISKQQLEKLKSVMV-----------N-PNNRPVQEINSRWIIEGF----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G7A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132479 for 1701 contacts (-77.9/contact) +
2D Compatibility (PS) -23296 + (NN) -11704 + (LL) 8056
1D Compatibility (HY) -16800 + (ID) 3550
Total energy: -179773.0 ( -105.69 by residue)
QMean score : 0.346
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