Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MWQKNQTSLADFILEGLFDDSLTHLFLFSLTMVVFLIAVS---------GNTLTILLICIDPQLHTPMYFLLSQLSLMDLMHVSTIILKMATNYLS-GKKSISFVGCATQHFL----YLCLGGAECFLLAVMSY-----DRYVAICH--PLRYAVLMNKKVGLMMAVMSWLGASVNSLIHMAILMHFPFCGPRKVYHFYCE-FPAVVKLVCGDITVYETTVYI------SSILLLLPIFLISTSYVFILQSVIQMRSSGSKRNAFATCGSHLTVV-SLWFGACIFSYMRPRSQCTLLQNKVGSVFYSIITPTL--NSLIYTLRNKDVAK----ALRRVLR--RDVITQCIQ---------RLQLWLPRV------------------------- |
| 4RUW Chain:A ((53-438)) | RRDLRVMTWNIH-TAVAPDAPGVVDEPRIAAVIRAEAPDVVVLNEVHRDAPGPGSHGDQPARLAELLAADGYVHTWFGLTEV---DLPHEGAVLPGSSNGNVVMSRHP--FVGGGVVVPLPNENYEPGGKLRRSLLTVTVDVPGLGDVVVHATHLSTPGSAVLVEDQKEQLRIVLDHVDARVPSVLA-GDLNIWTTDVPTQPYSQNNLMQSWIAEDHLADTWRQVNDPGAGPTMTASYGRPESPHPDRRIDYVFATPAFDVVAGHVSLVDRFAS--DHLGVVMDLRLGG------APVAARTVLAGEDGLDGWAQLTASRPGRLRLSVCKNRGQADDDGTAVRAVLRNRAGVALRTVTDSGTSRDRCTVETWRGALPPGARLEACLVGADGTILASRTETL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4RUW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -284774 for 2416 contacts (-117.9/contact) +
2D Compatibility (PS) -32070 + (NN) 2718 + (LL) 1408
1D Compatibility (HY) 4800 + (ID) 3250
Total energy: -311168.0 ( -128.79 by residue)
QMean score : 0.155
|
|
|