Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEFKSIRNIAIIAHVDHGKTTLLDNMLKQSGTFRENQ-EVQERVMDSGNQERERGITILAKCTSIMWG-----DEKINIIDTPGHADFGGEVERVLCMVDGVLLLVDAAEGPMPQTKFVLSKALKADLKSIVIINKVDRPDSR----I-------DEVLNEIYELFFNLDATN----EQLDFPVLYASGRNGWCIKELS------------------D-KR-------------------------------------------------------------------------------KDL-SPLFSTVIDYIKPANY---------------------------DRNAPFAMLVTLLESDKFL-GRILTGKIYQGIAKVNSDLKVLDLDGK------VIKRGRLTKLLSFSGLKRIPVEQAVAGDIIAIAGLEK-ASVSATIVAPE---VTTAISSTP-VDPPTMAITLSVNDSPFAGQEGTKLTSAIIKDRLYAEAEINVAITVTPTPNDEAFEVGGRGELQLGVLIENMRRE--GFELSVSRPRVLFKE-E-------------------------------------------------------------------------------------------------------------------------------------------------------------GGKKLEPIEEVVIDVDDEYSGIIMKKLSFRKGEVTDMRPSG-SGRTRLIFLVPSRGLIGYQGEFLTDSRGTGIINRLFHSYAPYKGPISRRRNGVLISTDKGEAVAYAIFNLQDRGIMFIKPQDRVYCGMVVGQHSRDNDLEINVLKGKQLTNVRAAGSDEAIKLTPPKTMTLEDMIAYIDDDELVEVTPKSIRLRKKFLDPNERRRAEKAKNKE |
| 3JB9 Chain:B ((137-925)) | --GTDDVRSFIVAGHLHHGKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLERERVMSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVVDVIEGVMINTTRIIKHAILHDMPIVLVLNKVDRLILELRLPPNDAYHKLRHVIDEVNDNICQISKDLKYRVSPELGNVCFASCDLGYCFTLSSFAKLYIDRHGGIDVDLFSKRLWGDIYFDSKTRKFAKQSLDGSGVRSFVHFILEPLYKLHTLTISDEAEKLKKHLSSFQIYLKPKDYLLDPKPLLQLICASFFGFPVGFVNAVTRHIPSPRENAARKASQSYIGPINSSIGKAILEMSREESAPLVMHVTKLYNTVDANNFYAFARVYSGQVKKGQKVKVLGENYSLEDEEDMVVAH-IAEICVPCARYRLHVDGAVAGMLVLLGGVDNSISKTATIVSDNLKDDPYIFRPIAHMSESVFKVAVEPHN---------PSELPKLLDGLRKTNKSYPLSITK-VEESGEHTIFGTGEMYMDCLLYDLRTLYSEIEIRVSDPVARFCETAVDTSSIKCFSDTPNKKNRITMVVEPLEKGISNDIENGKVNINWPQKRISEFFQKNYDWDLLASRSIWAFGPDDRGTNILRDDTLSTDVDKNVLNSVKEYIKQGFQWGTREGPLCDETIRNVNFRLMDVVLAPEQIYRGGGQIIPTARRVCYSSFLTASPRLMEPVYMVEVHAPADSLPIIYDLLTRRRGHVLQDIPRPGSPLYLVRALIPVIDSCGFETDLRVHTQGQAMCQMVFDHWQVVPGDPLDKSIKPKPLEPARGSDLARDFLIKTRRRKGLVEDVSTTRYFDQEM--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192476 for 3828 contacts (-50.3/contact) +
2D Compatibility (PS) -51083 + (NN) -13370 + (LL) 5020
1D Compatibility (HY) -24400 + (ID) 5300
Total energy: -281609.0 ( -73.57 by residue)
QMean score : 0.432
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