Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEVVTFGCRLNFYESELIKEALRKAE--RENVVVVHSCAVTNEAERQVKQKIRKIYKNDPNKEIIVVGCAVQLDPESYSNIPGVSKVLGNQDKLKTENYLLSNNKILVNDNQASKSEPALIDKFKDKSRAFIEVQNGCDHSCTFCSITEARGNNR-SVPINNIIEQIKIFVANGYQEVVFTGVDITDFGTDLFGKPSLGLMVRRVLKDVPELKRLRLSSIDVAEVDDELMDLIVNESRFMPHLHLSLQSGNNLILKRMKRRHSREQVIEFCHKVKSLRSNIAYGADIIAGFPTETDEMFQDTVNLLEETNTVYLHAFPYSKRKNTPAARMPQVPENVRKERVKNLRKINKAM---MSNFYQSLIGTKQSVLVEQNNI-------GRAENFALVKFTSKIQAKSIVKATIIGMESGYLVGSIIP----- |
| 3T7V Chain:A ((12-348)) | ----------------SLGDKVIEGYQLTDNDLRTLLS-LESKEGLERLYSAARKVRDHYFGN--------------------------------------------------------------RVFLNCFIYFSTYCKNQCSFCYYNCRNEINRYRLTMEEIKETCKTLKGAGFHMVDLTMGEDPYYYED---PNRFVELVQIVKEELG-----LPIMISPGLMDNATLLKAREKG--ANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQ--GYCVEDGILTGVG-NDIESTILSLRGMSTNDPDMVRVMTFLPQEGTPLEGFRDKSNLSELKIISVLRLMFPKRLIPASLDLEGIDGMVLRLNAGANIVTSILPPDSQLEGVANYDRDLEERDRDIKSVVRRLEIMGMKPARQADFEAVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T7V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44922 for 2638 contacts (-17.0/contact) +
2D Compatibility (PS) -33749 + (NN) -12517 + (LL) 5800
1D Compatibility (HY) -3600 + (ID) 2100
Total energy: -91088.0 ( -34.53 by residue)
QMean score : 0.391
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