Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHVHKNVVEFFLNQELNISDPDKDGWTSLHYAVQRGCLEVVKFLARKGKSINVENAYGSKPVHRAASGGHKNVVEFFLIKE
3TWT Chain:A ((56-128))
-----SVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHG
General information:
TITO was launched using:
RESULT:
Template:
3TWT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37580 for 522 contacts (-72.0/contact) +
2D Compatibility (PS) -7974 + (NN) -5305 + (LL) 552
1D Compatibility (HY) -7200 + (ID) 1150
Total energy: -58657.0 ( -112.37 by residue)
QMean score : 0.570
(partial model without unconserved sides chains):
PDB file :
Tito_3TWT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TWT-query.scw
PDB file :
Tito_Scwrl_3TWT.pdb
: