Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRIPFLLILIIVIASLPVINNWLSYHNQTLNDDYIGERLDNYISRNFDKIIKILREESIKSNYAARDNATKGKILQYENKIFDLAYPYLGNENSNIIAVGFFDYSCGYCKAIKDD-----IKQLINDGKIKYIFRDTPILGNNSLKAAKSALAVYFIDKGKYFDFHYAILDHKGEF------SDENILDIVKSIGINEDNFNNSMKNNAGKIEQMINDSKFLVRELGAGGTPFLIIG-----------DSLFIGATDLDVLRKKVDELSHKQN---- |
| 3F4S Chain:A ((20-218)) | ----------------------------------------------------------------------TSNELLLPLPN-----DKLLGDPKAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFP-LDYRGLKAAMLSHCYE--KQEDYFNFNKAVFNSIDSWNYYNLSDLTLLQRIAALSNLKQDAFNQCI-NDKKIMDKIVNDKSLAINKLGITAVPIFFIKLNDDKSYIEHNKVKHGGYKELKYFTNVIDKLYGKAIVKLE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3F4S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -63780 for 1277 contacts (-49.9/contact) +
2D Compatibility (PS) -18933 + (NN) -10105 + (LL) 6576
1D Compatibility (HY) -12800 + (ID) 2000
Total energy: -101042.0 ( -79.12 by residue)
QMean score : 0.541
|
|
|