Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIGSPVILAPMSGVTDYPFRSIVKKL-GASLLVSEMIASRAMIMQTRQSMQKAKVDELTA-----------VQLAGCEPDIMAEAAKLNEDMGAKIIDINFGCPVKKVVNGYAGSALMRNEKKAAEIIEAVVKAV--NVPVTVKIRTGWNNENRNAPRLAKIAEDLGAKMITVHGRTRAQLYNGQA-DWKFIRNVKEQVKIPVIVNGDIKSLNDIQNALKESRADGVMIGRGAYGRPWLINQAINFLSGSEVSEPTAS-EKLSIILEHYDNILEYYGND--AGIKIARKHIGWYSSGFKNSSEFRVRVNNMTDSMEVKENIVSF-FSQV |
| 4BFA Chain:A ((22-338)) | -ASMRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRIC--PELQNASRTPSGTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEK-KFEIADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKY-------NEPRMPWPEVVALLQKYTR-LEKQGDTGLYHVARIKQWLSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDIEKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142087 for 2544 contacts (-55.9/contact) +
2D Compatibility (PS) -32494 + (NN) -10732 + (LL) 964
1D Compatibility (HY) -17200 + (ID) 4200
Total energy: -205749.0 ( -80.88 by residue)
QMean score : 0.599
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