Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLSKYKNQSVAVFGLGKTGL-SVINVLIKSGAKAYAWDDSKEQMANAKTMYKECNF-IHPKKYDWHEIKALILSPGVPISYPKPHWIVKLARSFDCKIKSDIELFLEAKAKNQKIVGVTGTNGKSTTTSLIGHILKSAGKK-VAIGGNLGVPILD-L-EKDAEIYVIEISSFQLELINMPAVIPVHDHTFFSGSQYRAAWMIKRVSEMTKKMTEVTKRMAGMIKVDISVLLNITLDHIDRHG-SMENYIAVKSKLIGG---SKVAVIGCDNEITADIFNKFTGNKIPISGVRSLLDDKKGAEI-----QEISLKL--ENHNLSASDAKINLTSNAENIAASCAVCKLLKVDSSTIIDGIKSFSGLKHRNELLGK----IENVLFVNDSKATNAESSKKAILSYK------NIYWIVGGRSKEG----GIESLSKHFARIRKALLI-----------GESTEVFASTMENK--VDYVRCCNLEDAFRLAFEEAIKSKEKTTILLSPACASFDQWRNFEERGEAFCRMFEKLRDSFTITRVV |
| 1P3D Chain:A ((16-470)) | -----RRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVT-QRLAQAGAKIYIGHAEEHIEGASVVVVSSAIKDDNPE----LVTSKQKRIPVIQRAQMLAEIM-RFRHGIAVAGTHGKTTTTAMISMIYTQAKLDPTFVNGGLVKSAGKNAHLGASRYLIAEADESDASF--------------------------------------------LHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVLMELVPKV-GRQVITYGFSEQ--ADYRIEDYEQTGFQGHYTVICPNNERINVLLNVPGKHNALNATAALAVAKEEGIANEAILEALADFQGAGRRFDQLGEFIRPNGKVRLVDD-YGHHPTEVGVTIKAAREGWGDKRIVMIFQP-HRYSRTRDLFDDFVQVLSQVDALIMLDVYAAGEAPIVGADSKSLCRSIRNLGKVDPILVSDTSQLGDVLDQ---IIQDGDLILAQGAGSVSKISRGLAESW-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176867 for 3653 contacts (-48.4/contact) +
2D Compatibility (PS) -43593 + (NN) -7771 + (LL) 7228
1D Compatibility (HY) -12400 + (ID) 3450
Total energy: -236853.0 ( -64.84 by residue)
QMean score : 0.453
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