Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHDKFDNVTFTINGTRESLFNFVFCEDQCTELSVQKTLDYLRARNIEATWVMNSHTKTQGILEKCGIKHVSTPKKVLLNMKNYFLPADVVPGLKLNAVTSSNLLKQLDSYTSKIFHHSIG--IVSTFFRGLSNYDDKNSGLRFFLVTLNDEIIGTCGFYIQ------DSVAGFYSDGVLPIYRNRGIGTQMVLDRIKIIQQLECKHVVAHCMKPSVNLYKRLGFQILGNLYLYTSSA |
3FYN Chain:A ((20-164)) | ----------------------------------------------------------------------------------------QGLSPQVRTA-HIGDVPVLVRLMSEFYQEAGFALPHDAAIRAFKALLGKPDLGRIWLIAEGTESVGYIVLTLGFSMEYGGLRGFVDDFFVRPNARGKGLGAAALQTVKQGCCDLGVRALLVETG-----VYSRAGFEESGRMLLGQALA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FYN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97383 for 887 contacts (-109.8/contact) +
2D Compatibility (PS) -13514 + (NN) 17 + (LL) 6236
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -107194.0 ( -120.85 by residue)
QMean score : 0.410
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