Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLRKNLITSESVAAGHPDKVADQISDAVLDEYLLTDPFSRTAIETLVTKDNVIIAGEVFGPN-VANSTIENVVRNTIKDIGYEH--DGFHWGEVGVNMLLHEQSNDIAIGVDQGAGDQGIMYGYATIETKSLMPAPIFYAHSILKNVMSVVKE---AKLGPDAKSQITLAYESNLPVRAESIIVSIQHPEDLDQ-LKVKEII-YPYVVSSLP---KGW-MCAEENFFVNPTGRFVIGGPVSDCGLTGRKIMVDTYGGYIPHGGGAFSGKDATKVDRSAAYMARYLAKNIVFANLAERCLVQLSYAIGVSKPTSFYIDTFGTNKVDEERIKKLIESNIDLSTRGIIKHLSLSRPIYKRTACYGHFGKESEEDDGFSWENLNLSLDLSREFSVQSNRKVSLDC |
| 3S82 Chain:A ((9-407)) | ----GRLFTSESVTEGHPDKICDAISDSVLDALLAQDPRSRVAVETLVTTGQVHVVGEVTTTAKEAFADITNTVRERILDIGYDSSDKGFDGASCGVNIGIGAQSP----------GDQGLMFGYAINDTPERMPLPIALAHRLSRRLTEVRKNGVLPYLRPDGKTQVTIEFEDDVPVRLDTVVISTQHAADIDLENTLTPDIREKVLNTVLNDLAHDTLDTSSTRLLVNPTGKFVVGGPMGDAGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNIVAAGLAERVEVQVAYAIGKAAPVGLFIETFGTATVDPVKIEKIVPEVFDLRPGAIIRDLDLLRPIYAQTAAYGHFGRTD---VELPWEQLNKVDDLKRAI------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S82.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168697 for 3211 contacts (-52.5/contact) +
2D Compatibility (PS) -38286 + (NN) -12317 + (LL) 1760
1D Compatibility (HY) -27200 + (ID) 8850
Total energy: -253590.0 ( -78.98 by residue)
QMean score : 0.490
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