Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFGNIKWFNAEKGYGFIKPEANGNDIFVHISTLERSGIRPDSLRGENKEKGIKGERVSYELKEERGRNGEGK-KFAINLKLLED
3A0J Chain:A ((1-69))
MQKGRVKWFNAEKGYGFIEREG-DTDVFVHYTAINAKGFRT--LN--------EGDIVTFDVEPGRN----GKGPQAVNVTVVEP
General information:
TITO was launched using:
RESULT:
Template:
3A0J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30268 for 481 contacts (-62.9/contact) +
2D Compatibility (PS) -7060 + (NN) 937 + (LL) -116
1D Compatibility (HY) -7600 + (ID) 1500
Total energy: -45607.0 ( -94.82 by residue)
QMean score : 0.701
(partial model without unconserved sides chains):
PDB file :
Tito_3A0J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A0J-query.scw
PDB file :
Tito_Scwrl_3A0J.pdb
: