Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMLDKENPIIKEFEEAGAILHGHFVLSSGLHSDTYTQCAKIFENPSRAMKVCELLANKIKKELNSSIDLILSPAIGGIIVGYEIGRQLRMKTMFCER--VN-------------G--KFELRRGFEIKRGEKILLVEDVITTGKSSLEAVKCAEDMGGKVVAEASLIKRNS--E---TK-LPFSIISLLELSIKNYSEAELPEELKKLPIIKPGSREYLSNCSK
2DY0 Chain:A ((24-181))
------------------------------PGILFRDVTSLLEDPKAYALSIDLLVERYKN---AGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVD-AIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGITSYSLVPFPGH------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2DY0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82305 for 1045 contacts (-78.8/contact) +
2D Compatibility (PS) -13973 + (NN) 1876 + (LL) 4312
1D Compatibility (HY) -11200 + (ID) 1450
Total energy: -102740.0 ( -98.32 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_2DY0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DY0-query.scw
PDB file :
Tito_Scwrl_2DY0.pdb
: