Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLRIIAGKYRGRRIATGKHLAARPTMSIVREAVFNILSSKKIIYNLNILDLFCGSGSFSFEALSRGAKHAFIVDLDYYNLQLPEKTAKDLGITDSITLICCSANALPK---PVSKCDIVFIDPPYYSNLV--NSTLDGLANSGWLSDDALIILEVRKNED-FQCSKNFSVILERTYGIARIIFLSLST
3P9N Chain:A ((2-185))
MTRIIGGVAGGRRIAVPP-RG---TTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLS-GATLRRGAVAAVVAAGTT-SPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERL-
General information:
TITO was launched using:
RESULT:
Template:
3P9N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143060 for 1424 contacts (-100.5/contact) +
2D Compatibility (PS) -19089 + (NN) -6803 + (LL) 316
1D Compatibility (HY) -6000 + (ID) 2700
Total energy: -177336.0 ( -124.53 by residue)
QMean score : 0.629
(partial model without unconserved sides chains):
PDB file :
Tito_3P9N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P9N-query.scw
PDB file :
Tito_Scwrl_3P9N.pdb
: