Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIIYCITKADNGGAQTHLIQLANHFCV---HHDVYVIVGNHGPMIEQLD--ARVN-VIILEHLVGPID-FKQDILAVKVLAQLFSKIKPDVIHLHSSKA-GTVGRIAKFISKSKDTRVVFTAHGWAFTEGVKPAKKFLYLVIEKLMSCITDSIICVSDFDKQLALKYRFNRLKLTTIHNG-IADVPAVKQTLKSQSHNNIGEVVGMLPNKQDLQINAPTKHQFVMIARFAYPK--LPQNLIAAIEILKLHNS-NHAHFTFIGDGPTLNDCQQQVVQAGLENDVTFLGNVI--NASHLLSQYDTFILISKHEGLPISIIEAMATGLPVIAS-HVGGISELVAD-NGICMMNNQPETIAKVLEKYLIDSDY-IKMSNQSRKRYLECFTEEKMIKEVEDVYNGKSTQ |
| 3OT5 Chain:A ((28-396)) | IKVMSIFGTRPEA---IKMAPLVLALEKEPETFESTVVITA----LDQVLEIFDIKPDIDLDIMK-GQTLAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQ---KMLGHVEAGLRTWNKYSPF---PEEMNRQLTGVMADIHFSPTKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQKDY---HHPI-------------LENLGDNRLILMTAHRRENLGEPMQGMFEAVREIV--ESREDTELVYPMHLNPA-VREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAGTLKLIGT-NKENLIKEALDLLDNKESHDKMAQAANP-YGDGFAANRILAAIKSHFEETD-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -237061 for 2961 contacts (-80.1/contact) +
2D Compatibility (PS) -37245 + (NN) -12315 + (LL) 1284
1D Compatibility (HY) -2800 + (ID) 2200
Total energy: -290337.0 ( -98.05 by residue)
QMean score : 0.443
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