Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAHLSVKLRLLILALIDSLIVTFSVFVSYYILEPYFKTYSVKLLILAAISLFISHHISAFIFNMYHRAWEYASVSELILIVKAVTTSIVITMVVVTIVTGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNKKPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPELVRKYKIKKIIIAIPTIGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVEDLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIYLINRELRNRFGKNVDIVPIIADVQNRARMFEIMETYKPYAVYHAAAHKHVPLMEDNPEEAVHNNILGTKNTAEAAKNA-EVKKFVMISTDKAV---------------NPPNVMGASKRIAEMIIQSLNDE--------THRTNFVAVRFGNVLGSRGS----VIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALA-----EGGEVFVLDMG--EPVKIVDLARNLIKLSGKKEDDIRITYTGIRPGEKMFEELMNKDEVHPEQVFEKIYRGKVQHMKCNEVEAIIQDIVNDFSKEKIINYANGKKGDNYVR |
1RKX Chain:A ((4-339)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NSFWQGKRVFVTGHTGFKGGWLSLWLQTMG-ATVKGYSLTAPTVPSLFETARV----ADGMQSEIGDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGA---SWQL----------------EAHYLKLDCSKAKMQLGWH-PRWNLNTTLEYIVGWHKNWLSG------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RKX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116669 for 2541 contacts (-45.9/contact) +
2D Compatibility (PS) -32142 + (NN) -9551 + (LL) 26652
1D Compatibility (HY) -8800 + (ID) 2950
Total energy: -143460.0 ( -56.46 by residue)
QMean score : 0.510
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