Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNDLKEVLLTEEDIQNICKELGAQLTKDYQ--GKPLVCVGILKGSAMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAKYVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVYSN
4RHT Chain:C ((23-195))
-----KSVLLTAEQIQARIAELGEQIGNDYRTTGQDLLLITVLKGAVLFVTDLARAIPVPTQFEFMAVSSYG-------VVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAV-ANVEIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTL-------
General information:
TITO was launched using:
RESULT:
Template:
4RHT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116322 for 1197 contacts (-97.2/contact) +
2D Compatibility (PS) -17146 + (NN) -2989 + (LL) 204
1D Compatibility (HY) -20800 + (ID) 3950
Total energy: -161003.0 ( -134.51 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_4RHT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RHT-query.scw
PDB file :
Tito_Scwrl_4RHT.pdb
: