Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKNLISIIIILCLTLSIMTPYAQATNSDVTPVQAANQYGYAGLSAAYEPTSAVNVSQTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELSNTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHFVNPTGAENSRLRSFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAVTYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGGEKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVENDLYDVLPSDFSKKDYKLVVEDGKVHADYPREFINKDYGPPTVEVHQPIIQKANTVAKSMWEEHPLFTIIGGACLVAGLALIVHMIINRLFRKRK
1HD8 Chain:A ((3-356))--------------LNIKTMIPGVPQIDAESYILID-------------------YNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIG---------------NLKPGMQVPVSQLIRDINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHG--------------LDADGQYSSARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNS---LNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRT------FKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPVWFGDSDRASLGV----DKDVYLTIPRGR------MKDLKASYVLNSSELHAPLQKNQ--------VVGTINFQLDG-----KTIEQRPLVVLQEIPEGN


General information:
TITO was launched using:
RESULT:

Template: 1HD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -67752 for 2783 contacts (-24.3/contact) +
2D Compatibility (PS) -36530 + (NN) -15814 + (LL) 6536
1D Compatibility (HY) -9600 + (ID) 4150
Total energy: -127310.0 ( -45.75 by residue)
QMean score : 0.333

(partial model without unconserved sides chains):
PDB file : Tito_1HD8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HD8-query.scw
PDB file : Tito_Scwrl_1HD8.pdb: