Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METLFSGIQPSGIPTIGNYIGALKQFVDVQNDYDCYFCIVDQHAIT-MPQDRLKLRKQTRQLAAIYLASGIDPDKATLFIQSEVPAHVQAGWMLTTIASVGELERMTQYKDKAQKAVEGIPAGLLTYPPLMAADIVLYNTN---IVPVGDDQKQHIELTRNLVDRFNSRYNDVLVKPEIRMPKVGGRVMSLQDPTRKMSKSDDNAKNFISL-LDEPNVAAKKIKSAVTDSDGIIKFDRDNKPGITNLISIYAGLTDMPIKDIEAKYEGEGYGKFKGDLAEIVKAFLVEFQEKYESFYNSDKLDDILDQGRDKAHKVSFKTVKKMEKAMGLGRKR |
| 1D2R Chain:A ((1-326)) | MKTIFSGIQPSGVITIGNYIGALRQFVELQHEYNCYFCIVDQHAITV-WQDPHELRQNIRRLAALYLAVGIDPTQATLFIQSEVPAHAQAAWMLQCIVYIGELERMTQFKEKSAGA-AAAAAGLLTYPPLMAADILLY---NTDIVPVGEDQKQHIELTRDLAERFNKRYGELFTIPEARIPKVGARIMSLVDPTKKMSKSDPNPKAYITLL-DDAKTIEKKIKSAVTDSEGTIRYDKEAKPGISNLLNIYSTLSGQSIEELERQYEGKGYGVFKADLAQVVIETLRPIQERYHHWMESEELDRVLDEGAEKANRVASEMVRKMEQAMGLGR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D2R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151724 for 2542 contacts (-59.7/contact) +
2D Compatibility (PS) -34188 + (NN) -14311 + (LL) 632
1D Compatibility (HY) -34000 + (ID) 10050
Total energy: -243641.0 ( -95.85 by residue)
QMean score : 0.554
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