Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTILAEIVKYKQSLLQNGYYQDKLNTLKS--VKIQNKKSFINAIEKEPKLAIIAEIKSKSPTVNDLPERDLSQQISDYEKYGANAVSILTDEKYFGGSFERLQALTTKTTLPVLCKDFIIDPLQIDVAKQAGASMILLIVNILSDKQLKDLYNYAISQNLEVLIEVHDRHELERAYKVNAKLIGVNNRDLKRFVTNVEHTNTILENKKPNHHYISESGIHDASDVRKILHSGIDGLLIGEALMRCDNLSEFLPQLKMQKVKS |
3QJA Chain:A ((4-261)) | ATVLDSILEGVRADVAAREASVSLSEIKAAAAAAPPPLDVMAALR-EPGIGVIAEVK------------DPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARDLMTLDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTSGDPRAAVADLVTA---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3QJA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -149753 for 2072 contacts (-72.3/contact) +
2D Compatibility (PS) -25560 + (NN) -4004 + (LL) 552
1D Compatibility (HY) -13200 + (ID) 3700
Total energy: -195665.0 ( -94.43 by residue)
QMean score : 0.535
|
|
|