Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFAVIGNPISHSLSPVMHRANF----NSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIPHKERIIPYLDYVDEQAINAGAVNTVLIKDGKWIGYNTDGIGYVKGLHSVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRTMARFESWNLNINQISLADA--EKYLAEFDIVINTTPAGMAGNNESIINLKHLSPNTLMSDIVY---IPYKTPILEEAERKGNHIYNGLDMFVYQGAESFKIWTNKDADINSMKTAVLQQLKGE |
| 4FQ8 Chain:B ((6-246)) | --FGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLES-HIKSEFLHLG-LSGANVTLPFKERAFQVCDKIKGIALECGAVNTLVLENDELVGYNTDALGFYLSLKQ--KNYQNA--LILGAGGSAKALACELKK-QGLQVSVLNRS-----SRGLDFFQRLGCDCFMEPPKSAFDLIINATSASL--HNELPLNKEVLKGYFKEGKLAYDLAAGFLTPFLSLAKELKTPFQDGKDMLIYQAALSFEKFS-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FQ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104149 for 1965 contacts (-53.0/contact) +
2D Compatibility (PS) -24417 + (NN) -1883 + (LL) 3200
1D Compatibility (HY) -18000 + (ID) 4300
Total energy: -149549.0 ( -76.11 by residue)
QMean score : 0.404
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