Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGIIGAMEEEVT-ILKNKLTQLSEISVAHVKFYTGILKDREVVITQSGIGKVNAAISTTLLINKFKPDVIINTGSAGALDESLNVGDVLISDDVKYHDADATAFGYEYGQIPQMPVAFQSSKPLIEKVSQVVQQQQLTAKVGLIVSGDSFIGSVEQRQKIKKAFPNAMAVEMEATAIAQTCYQFNVPFVVVRAVSDLANGEAEMSFEAFLEKAAVSSSQTVEALVSQL
4BMZ Chain:B ((25-251))
-IGILGAMREEITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAGSLVKDLKINDLLVAIQLVQHDVDLSAFDHPLGFIPESAIFIETSESLNALAKEVANEQHIVLKEGVIASGDQFVHSKERKEFLVSEF-KASAVEMEGASVAFVCQKFGVPCCVLRSISNNADEEANMSFDAFLEKSAQTSAKFLKSMVDEL
General information:
TITO was launched using:
RESULT:
Template:
4BMZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130356 for 2016 contacts (-64.7/contact) +
2D Compatibility (PS) -24597 + (NN) -10544 + (LL) 68
1D Compatibility (HY) -18400 + (ID) 4150
Total energy: -187979.0 ( -93.24 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_4BMZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BMZ-query.scw
PDB file :
Tito_Scwrl_4BMZ.pdb
: