Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MQQHSSKTAYVYS-DKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATGDELMLIHKYDYVEAIKHASHGIISEDEAKKYGLN--------------DEENGQF---------KHMHRHSATIVGGALTLADLIMSG--KVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYIAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPG-SGHYTERGEDIGYGHTVNVPLEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVIMFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYLPLEWINKWKHYSSELLPKRWEDRLNDYTYVPRTKEISEKNKKLALHIASWYESTRQ |
| 3MEN Chain:A ((21-359)) | SMLTYFHPDQSLHHPRTYFSRGRMRMPQEVPERAARLVAAAFAMGF----PVREPDDFGIAPIAAVHDTHYLRFLETVHREWKAMPEDWGDEAMSNIFVREPNALRGVLAQAARHLADGSCPVGEHTWRAAYWSAQSALAAAAAVRDGAPAAYALCRPPG--HHARVDAAGGFCYLNNAAIAAQAL-RARHARVAVLDTDMHHGQGIQEIFYARRDVLYVSIHGDPTNFYPAVAGFDDERGAGEGLGYNVNLPMPHGSSEAAFFERVD-DALRELRRFAPDALVLSLGFDVYRDDPQSQVAVTTDGFGRLGHLIGAL-----RLPTVIVQEGGYH-----------------------------------------------------------------IESLEANARSFFGGFGA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MEN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150789 for 2810 contacts (-53.7/contact) +
2D Compatibility (PS) -33268 + (NN) -11080 + (LL) 5408
1D Compatibility (HY) -4000 + (ID) 3500
Total energy: -197229.0 ( -70.19 by residue)
QMean score : 0.465
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