Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYITNDGDWR---------KQNNITAEIKSTDE-----LHLENGEALEISQLLKESSSGQPYDAVFPLLHGPNGEDGTIQGLFEVLDVPYVGNGVLSAASSMDKLVMKQLFEHRGLPQLPYISFLRSEYEKYEHNILKLVNDKLNYPVFVKPANLGSSVGISKCNNEAELKEGIKEAFQFDRKLVIEQGVNAREIEVAVLGNDYPEATWPGEVVKDVAFYDYKSKYKDGKVQ------LQIPADLDEDVQLTLRNMALEAFKATDCSGLVRADFFVTEDNQIYINETNAMPGFTAFSMYPKLWENMGLSYPELITKLIELAKERHQDKQKNKYKID |
| 3SE7 Chain:A ((6-340)) | -----IGIIFGGVSEEHDISVKSAREVATHLGTGVFEPFYLGITKSGAWQLCDGPGENWEDGNCRPAVLSPDRSVHGLLVLEQGKYETIR-----------LDLVLPVLHGKLGEDGAIQGLLELSGIPYVGCDIQSSALCMDKSLTYLVARSAGIATPNFWTVTADE---------KIPTDQLTYPVFVKPARSGSSFGVSKVAREEDLQGAVEAAREYDSKVLIEEAVIGTEIGCAVMGNG-PELI-TGEVDQITLS-------------GSDNSAVTVPADISTTSRSLVQDTAKAVYRALGCRGLSRVDLFLTEDGKVVLNEVNTFPGMTSYSRYPRMMTAAGLSRADVIDRLVSLA--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SE7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165077 for 2502 contacts (-66.0/contact) +
2D Compatibility (PS) -33412 + (NN) -18836 + (LL) 3124
1D Compatibility (HY) -22800 + (ID) 5750
Total energy: -242751.0 ( -97.02 by residue)
QMean score : 0.570
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