Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRCAKKE-DLNAILAIYNDAIINTTAVYTYKPQTIDERIAWFETKQRNHEPIFVFE-ENGSVLGFATFGSFRPWPAYQYTIEHSIYVDASARGKGIASQLLQRLIVEAKAKGYRTLVAGIDASNEASIKLHQKFNFKHAGTLTNVGYKFDYWLDLAFYELDLKD
2JLM Chain:A ((12-174))
-FVECTEDQHALEILEILNDAIINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQLLGFASWGSFRAFPAYKYTVEHSVYIHKDYRGLGLSKHLMNELIKRAVESEVHVMVGCIDATNVASIQLHQKLGFIHSGTIQQAGFKFGRWLDAAFYQLTLD-
General information:
TITO was launched using:
RESULT:
Template:
2JLM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88195 for 1145 contacts (-77.0/contact) +
2D Compatibility (PS) -17628 + (NN) -7701 + (LL) 132
1D Compatibility (HY) -15200 + (ID) 3800
Total energy: -132392.0 ( -115.63 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_2JLM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JLM-query.scw
PDB file :
Tito_Scwrl_2JLM.pdb
: