Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAINI-IEYNRSYKEELIEFILSIQKNEFNI-----K-IDRDDQPDLENIEHNYLNS-GGQFWLAINNHQNIVGTIGLIRLD-------NNMSALKKMFVDKGYRNLKIGKKLLDKVIMTCKEQNIDGIYLGTIDKFISAQYFYSN-NGFREIKRGDL-PSSFPKLDVDNRF-YYRNLKD
1TIQ Chain:A ((2-174))
--SVKMKKCSREDLQTLQQLSIETFNDTFKEQNSPENMKAYLESAFNTEQLEKELSNMSSQFFFIYFDH-EIAGYVKVNIDDAQSEEMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERNKKNIWLGVWEKNENAIAFYKKMGFVQTGAHSFYMGDE----EQTDLIMAKTLILE
General information:
TITO was launched using:
RESULT:
Template:
1TIQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37680 for 1050 contacts (-35.9/contact) +
2D Compatibility (PS) -16495 + (NN) -5572 + (LL) 704
1D Compatibility (HY) -1600 + (ID) 1250
Total energy: -61893.0 ( -58.95 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_1TIQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TIQ-query.scw
PDB file :
Tito_Scwrl_1TIQ.pdb
: