Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKPFSKLFGLKNKDDIIGHIEEDRNSNVESIQIERIVPNRYQPRQVFEPNKIKELAESIHEHGLLQPIVVRPIEEDMFEIIAGERRFRAIQSLNLPQADVIIRDMDDEETAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIANKLRLLKLAPKVLLRLREGKIT-ERHARAVLSLSDSEQEALIEQVIAQKLNVKQTEDRVRQKTGPEKVKAQNLRFAQDVTQARDEVGKSIQAIQQTGLHVEHKDKDHEDYYEIKIRIYKR |
1R71 Chain:A ((23-136)) | ---------------------------------------------------------------------------------------------------------------EADQVIENLQRNELTPREIADFIGRELAKG-KKKGDIAKEIGKSPAFITQHVTLLDLPEKIADAFNTGRVRDVTVVNELVTAFKKRPEEVEAWLDDDTQEITRGTVKLLREFLDE------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R71.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15426 for 750 contacts (-20.6/contact) +
2D Compatibility (PS) -12601 + (NN) -9608 + (LL) 12644
1D Compatibility (HY) -4400 + (ID) 1200
Total energy: -30591.0 ( -40.79 by residue)
QMean score : 0.694
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