Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILKSSIDRLLQTIDIVEVISSYVDLRKSGSNYMACCPFHEERSASFSVNQVKGFYYCFGCGASGDSIKFVMAFEKLSFVEALEKLAHRFNIALEYDKGVYYDHKE---DYHLLEMVSSLYQEELFNAPFFLNYL----QKRGLSMESIKAFKLGLCTNKIDYGIENKGLNKDKLIELGVLGKSDKEDKTYLRFLDRIMFPIYSPSAQVVGFGGRTLKEKAAKYINSPQNKLFDKSSLLYGYHLAKEHIYKQKQVIVTEGYLDVILLHQAGFKNAIATLGTALTPSHLPLLKKGDPEILLSYDGDKAGRNAAYKASLMLAKEQRKGGVILFENNLDPADMIANHQIETLKNWLSRPIAFIEFVLRHMAGSYLL-DDPLEKDKALKEMLGFLKNFSLLLQNEYKPL-IATLLQAPLHVLGIREPVSFQPFYPKTEKPNRPQKFAHVSSMPSLEFLEKLVIRYLLEDRSLLDLAVGYIHSGVFLHKKQEFDALCQEKLDDPKLVALLLDANLPLKKGGFEKELRLLILRYFERQLKEIPKSPLSFSEKMIFLKRARQAIMKLKQGELVAI |
| 4WW4 Chain:A ((3-458)) | --------------QISEVRGNTRDHRTAAHTHIKGLGLNSSGIAE---KQAAGFV---GQCAAREACGVVVDLIKA----------HKMA-----GRGVLLAGGPGTGKTALALAISQELGTKIPFCPITGSEIYSTEVKKTEVLMENFRRAIGLRVRETKDVYE--GEVSTLLIGLKSARGQKLDQKERVQVGDVIYIETNTGACRSDAYA-TEFDLEAEEYVPIPKGEV---------------HKKKEIVQDVTLHDLDVANAR----PDIISMMGQLMKPKMTEITDKLRMEINKVVQKYINQGVAELIP-----------GVLFIDE----AHMLDIECFTYLNKALESPIAPIVVLASNRGIATIRGADDLKAAHGI--PPDFLQRLLIIPTHPYEPDEIRRIVRIRAQTEGVQ--------------------------------LTDAAVDRVAEHGVRISLRYCL---------------------------QLLAPASILARVNGR----------------TQVDVQDIAEAEEL-FLDARRSANILTSTGGLH-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178489 for 3025 contacts (-59.0/contact) +
2D Compatibility (PS) -42343 + (NN) -7208 + (LL) 12132
1D Compatibility (HY) -8800 + (ID) 3950
Total energy: -228658.0 ( -75.59 by residue)
QMean score : 0.289
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