Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDFSQLGGLSGLL-DGVKKEFS-QL-EEKNKDTIHTSKSGGGMVSVSFNGLGELVDLQIDDSL-LEDKEA-MQIYLMSALNDGYKAVEENRKNL-AFNMLGNFAKL
1J8B Chain:A ((7-98))
---------LGGLMKQAQQQEKMQKMQEEIAQLEVTGESGAGLVKITINGAHNCRRIDIDPSLME-DDKEMLEDLIAAAFNDAVRRAEELQKEKMASVTAG-----
General information:
TITO was launched using:
RESULT:
Template:
1J8B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6476 for 444 contacts (14.6/contact) +
2D Compatibility (PS) -8686 + (NN) -4843 + (LL) 732
1D Compatibility (HY) 4000 + (ID) 450
Total energy: -2771.0 ( -6.24 by residue)
QMean score : 0.151
(partial model without unconserved sides chains):
PDB file :
Tito_1J8B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J8B-query.scw
PDB file :
Tito_Scwrl_1J8B.pdb
: