Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFLNDHINVFGLIAALVILVLTIYESSSLIKEMRDSKSQGELMENGHLIDGIGEFANNVPVGWIASFMCVIVWAFWYFFFGYPLSSFSQIGQYNEEVKAHNQKFEAKWKHLGQKELVDMGQGIFLVHCSQCHGITADGLH-GSAQNLLRWDKE--EGIMDTIKHGSKGMDYPAGEMPAIE--MDEKDAKAIASYVMAELSSVKK--TKNPQLIDKGKELFES-------MGCAGCHGNDGKGLQENQVFAADLTTYGTESFLRNILTHGKKGN--IGRMPSFKYKNFSDLQVKALVEFIKSLKPLED |
| 1H1O Chain:A ((12-183)) | ----------------------------------------------------------------------------------------------------------------------------VSSDCMVCHGMTGRDTLYPIVPRLAGQHKSYMEAQLKAYKDHSRADQNGEIYMWPVAQALDSAKITALADYFNA-QKPPMQSSGIKHAGAKEGKAIFNQGVTNEQIPACMECHGSDGQGAG----PFPRLAGQR-YGYIIQQLTYFHNGTRVNTLMNQIA-KNITVAQMKDVAAYLSSL----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1H1O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -32045 for 1179 contacts (-27.2/contact) +
2D Compatibility (PS) -16469 + (NN) -5168 + (LL) 10104
1D Compatibility (HY) -3200 + (ID) 1850
Total energy: -48628.0 ( -41.25 by residue)
QMean score : 0.299
|
|
|