Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MKVYLRKIDNQILHNKRISIKKGILEHFFDKANNQDEVDMSGILSNYNDKVSILLATDPRLGGGIKRIISAEVDKIKENRLDYELKIDDILLFTYISYKKYTLEIILLADTRYNVLN----GLINNSKHLLVFSENETRTLDDGKINESVRIDGGKNIILYGVPGS---GKSYTLQRDYCNNSVVEKIVFHPDYSYSDFVGQIMPSVDDSGIVSYKFNPGPFTNILKKAYHNPQTKHVLVIDEINRGNVPAIFGEIFQLLDRLKHDKDGFKKGSSEYAINNTDIANIVHNDKNASIRIPSNLWIVATMNTSDQNVFTLDTAFQRRFSMQLVENSFENVDDDFKNMKILDTDMTWQKFCTTINEKIAQNNEGLSSMEDKRFGVYFVSIDDLKSKENFAHKVIKYLWDDVFKFDRNIIFNTTKFNTLEAVVKNFIKEKDRTQFDVFSDDIKELLFNV |
| 4R6Y Chain:A ((1-317)) | SMESVVTVYSIDG--LHDGDNS----WYQVQFDAFTKATGITVRYVEGGGGVVVERLAKERTNPQADVLVTAPPFIQRAAAEKLLANFNTD-------------TASAIPDANNLYSPLVKNYLSFIYNSKLLKTAPASW-QDLLDGKF---------KNKLQYSTPGQAADGTAVMLQAFHSFGS---------KDAGFAYLGKLQAN-----------NVGPSASTGK------------LTALVNKGEIYVANGDLQMNLAQMERNP---------------------------------NVKIFWPANDKGER-----SALAIPYVIGLVQGA--------------PQSENGKKLINFLLSKEAQ-----TRVSELSWGMPVRS--DVTPSDEHYKAATAAL-EGVQSWQPN---WDDVAVSLSADISRWHKVTES----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69964 for 2600 contacts (-26.9/contact) +
2D Compatibility (PS) -32685 + (NN) -9918 + (LL) 8716
1D Compatibility (HY) -2400 + (ID) 3150
Total energy: -109401.0 ( -42.08 by residue)
QMean score : 0.246
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