Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MIIIPARLKSSRFENKMLEDIFGLPMVVRCAKNANL---VDECVVACDDESIMKACQKFHIKAVLTSKHHNSGTERCLEAAQILGLKNDERVLNLQGDEPFLEKKVILALLEATQNAPF--MATCAKVIDEEQAKSPNLVKVVLDSQNNALYFSRSLIPFLRDFDAKRQTPLLGHIGIYGFHNKEILEELCALKPCVLEDTEKLEQLRALYYQKKILVKIVQSESMGIDTKEDLQNALKIFSPNLLKR-
1H7E Chain:A ((1-245))
SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQAFGGKAIMTRNDHESGTDRLVEVMHKV--EAD-IYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHAISAAEAAEPSTVKVVVNTRQDALYFSRSPIPYPRN--AEKA-RYLKHVG-IYAYRRDVLQNYSQLPESMPEQAESLEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRALMAQELAENA
General information:
TITO was launched using:
RESULT:
Template:
1H7E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140080 for 1817 contacts (-77.1/contact) +
2D Compatibility (PS) -25831 + (NN) -12723 + (LL) 420
1D Compatibility (HY) -14400 + (ID) 4200
Total energy: -196814.0 ( -108.32 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_1H7E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H7E-query.scw
PDB file :
Tito_Scwrl_1H7E.pdb
: