Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQEILIPLKEKSYKVFLGEL-PE-------IK--LKQKALIISDSIVAGLHLPYLLERLN--ALE------VRVCVIESGEKYKNFHSLERILNNAFEMQ--LNRHSLMIALGGGVISDMVGFASSIYFRGIDFINIPTTLLAQVDASVGGKTGINTPYGKNLIGSFHQPKAVYMDLAFLKTLEKREFQAGVAEIIKMAVCFDKNLVERLETKDL--------------------KDCLEEVIFQSVNIKAQVVVQDEKERNIRAGLNYGHTFGMLIENETNYERFLHGEAIAIGMRMANDLALSLGMLTLKEYERIENLLKKFDLIFNYQIT-----------DIQKFYERLFLDKKSENQTLKFILPKGVGAFEIA--SHIPKETILKVLEKWH |
| 1SG6 Chain:A ((11-392)) | ----------GRESIIADFGLWRNYVAKDLISDCSSTTYVLVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPTTLLAMVDSSIGGKTAIDTPLGKNLIGAIWQPTKIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEENAETILKAVRREVTPGEHRFEGTEEILKARILASARHKAYVVSA-----GLRNLLNWGHSIGHAIEAILTP-QILHGECVAIGMVKEAELARHLGILKGVAVSRIVKCLAAYGLPTSLKDARIRKLTAGKHCSVDQLMFNMALDKK-------IVLLSAIGTPYETRASVVANEDIRVVLA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SG6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222003 for 2678 contacts (-82.9/contact) +
2D Compatibility (PS) -33542 + (NN) -7154 + (LL) 2292
1D Compatibility (HY) -21200 + (ID) 5550
Total energy: -287157.0 ( -107.23 by residue)
QMean score : 0.503
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