Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNQASHLDNFMNAKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYSLYKKGYKVGVFDADIGLANLDVIFGVKTH-KNILHALKGEAKLQEIICEI-EPGLCLIPGDSGEEILKYISGAEALDRFVDEEGVLSSLDYIVIDTGAGIGATTQAFLNASDCVVIVTTPDPSAITDAYACIKINSK-NKDELFLIANMVAQPKEGRATYERLFKVAKNNIASLELHYLGAIENSSLLKRYVRERKILRKIAPNDLFSQSIDQIASLLVSKLETGTLEIPKEGLKSFFKRLLKYLG |
| 1G3Q Chain:A ((1-236)) | -------------------------MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSLVLGVDDPDVTLHDVLAGEANVEDAIYMTQFDNVYVLPGAVDWEHVLKADP-RKLPEVIKSLK--DKFDFILIDCPAGLQLDAMSAMLSGEEALLVTNPEISCLTDTMKVGIVLKKAGLAILGFVLNRYGRSDRD--IP---PEAAEDV---MEVPLLAVIPEDPAIREGTLEGIPAVKYKPESKGAKAFVKLAEEIEKLA------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G3Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165435 for 2191 contacts (-75.5/contact) +
2D Compatibility (PS) -25558 + (NN) -10907 + (LL) 4016
1D Compatibility (HY) -11600 + (ID) 2750
Total energy: -212234.0 ( -96.87 by residue)
QMean score : 0.601
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