Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKP-HEIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATIQSNAYDNALKQQGY-LNISHLATSLFVPLIEESILEGELLETCMHYYFTPL-EILPEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQKYALKNNAC---TFPKVEFHASGDVIWLERQAKEWLKL
1ZUW Chain:A ((4-254))
QPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYLLENHHIKMLVIACNTATAIALDDIQRSVGIPVVGVIQPGARAAIKVT--DNQHIGVIGTENTIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDQTADEIVKTSLYPLKDTSIDSLILGCTHYPILKEAIQRYMG------EHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQFLTTGARDQFAKIADDWFHV
General information:
TITO was launched using:
RESULT:
Template:
1ZUW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -228550 for 2228 contacts (-102.6/contact) +
2D Compatibility (PS) -26116 + (NN) -9145 + (LL) 212
1D Compatibility (HY) -16000 + (ID) 4150
Total energy: -283749.0 ( -127.36 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_1ZUW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZUW-query.scw
PDB file :
Tito_Scwrl_1ZUW.pdb
: