Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPFINIKLVPENGGPTNEQKQQLIEGVSDLMVKVLNKNKASIVVIIDEVDSNNYGLGGESIHHLRQKN
3M20 Chain:A ((1-59))
-PVLIVYG----PKLDVGKKREFVERLTSVAAEIYGMDRSAITILIHEPPAENVGVGGKLIADR----
General information:
TITO was launched using:
RESULT:
Template:
3M20.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22623 for 315 contacts (-71.8/contact) +
2D Compatibility (PS) -6863 + (NN) -5522 + (LL) 488
1D Compatibility (HY) -4000 + (ID) 550
Total energy: -39070.0 ( -124.03 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_3M20.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3M20-query.scw
PDB file :
Tito_Scwrl_3M20.pdb
: