Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQTLFKEITSK-------CYVNGNEMKENSSNV--------LDQYFTKPSVALKCFQKACEVIKKYENPD----------------DFIFLEPSA---GDGVFYD-------LFPK-DRRIGIDIEPKRDGFIQCDFLNYKLPVHQKVICLGNPPFGHRGVMALEFINHARN-CDFVCFILPMFFESQGK-GSIKYRVKGLNLLYSERLEKNAFIDF-KNKEVDVHCVFQIWSKKYQNKKSEFSWYKNRHKEPFSEYIKVFTVSLAKNR-ECGKEWIFNQ---KASFYISSTFYKSTQI-VENFEEVKYQSGIAVV----FTSADKVLNAKLKKLFQEID------------------WTKYASLATNSCYHLGKSHIFQALHDHLDSLKGN------- |
| 4FS7 Chain:A ((2-394)) | YDFVIDEITYNFTKEHGTVEVSGLREFLNPLVVNIPPVVTYKDNKYDVVSIGYAAFQG-CRKVTEIKIPSTVREIGEFAFENCSKLEIINIPDSVKMIGRCTFSGCYALKSILLPLMLKSIGVE------AFKGCDFKEITIP--EGVTVIGDEAFA--TCESLEYVSLPDSME----TLHNGLFSGCGKLKSIKL-PRNLKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKLLDSVKFIGEEAFESCTSLVSIDLPYLVEEIGKRSFRGCTSLSNINFPLSLRKIGANAFQGCINLKKVELPKRLEQYRYDFEDTTKFKWIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FS7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71308 for 2118 contacts (-33.7/contact) +
2D Compatibility (PS) -30476 + (NN) 9399 + (LL) 1184
1D Compatibility (HY) -20400 + (ID) 3250
Total energy: -114851.0 ( -54.23 by residue)
QMean score : 0.212
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