Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEIDNQTPLESDFLLLEKIADVLASTQIIELVLVSDETMREINRDLRDCDYATDVLSFPLEAIPHTPLGSVVINAPLAQENALKLGHSLEDEIALLFIHGVLHLLGYDHEKDKGEQ--RQKEGELIKAFDLPLSLIERTQEC
1IGN Chain:A ((8-93))
------------------------------------------------KASFTDEEDEFILDVVRKNPTRRTT-HTLYDEISHYVPNHT-GNSIRHRFRVYLSKRLEYVYEVDKFGKLVRDDDGNLIKTKVLPPSIKRKFSAD
General information:
TITO was launched using:
RESULT:
Template:
1IGN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19356 for 530 contacts (-36.5/contact) +
2D Compatibility (PS) -8796 + (NN) 905 + (LL) 5016
1D Compatibility (HY) -400 + (ID) 950
Total energy: -23581.0 ( -44.49 by residue)
QMean score : 0.180
(partial model without unconserved sides chains):
PDB file :
Tito_1IGN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IGN-query.scw
PDB file :
Tito_Scwrl_1IGN.pdb
: