Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVTRFKKAFISYSLGVLVVSLLLNVCNASAQEVKVKDYFG-EQTIKLPVSKIAYIGSYVEVPAMLNVWDRVVGVSDYAFKDDIVKATLKGEDLKRVKHMSTDHTAALNVELLKKLSPDLVVT-FVGNPKAVEHAKKF----GISFLSFQETTIAEAMQAMQAQATVLEIDASKKFAKMQETLDFIAERLKGVKKKKGVELFH---KANKISGHQAISSDILEKGGIDNFGLKYVKFGR-------ADISVEKIVKENPEIIFIWWVSPLTPEDVLNNPKFSTIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKAHPEAFKGVDINAIVKDYYKVVFDLNDAEIEPFLWH |
| 3R5T Chain:A ((3-298)) | -----------------------------NVWPRTFQNADGSITTIPSQPKRILST--AVTVTGTLLAIDAPVIASAATTQSTFFEQWRKLAELRQVKKLWPAG--SVDLESVYVEQPDLIVVSMIGADSARDQIPLLQAIAPTILVDYSDQTWQSLAQQL-GLATGLEEQAERTIHNFEQWTKQVRDVLDLPKGRANIVSYHGPGVVNAVAKAQSAHAQLLQSVGVVLEEPDPAWQAGSIVHRDFLRIHYEHLTQLQAETTFLITMTDQQAQAFLHDPILKNLPSIQRKQVYGLGE---NSFRIDLFSAREIINSLLRRFAGEQAQSLVMPL------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119006 for 2333 contacts (-51.0/contact) +
2D Compatibility (PS) -29729 + (NN) -9528 + (LL) 4984
1D Compatibility (HY) -7200 + (ID) 2650
Total energy: -163129.0 ( -69.92 by residue)
QMean score : 0.430
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