Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VGLQDELTMMQPVVMKIFSKSVRENRLSHGYLFEGTRGTGKKRTALWLAQSLFCLESTETELACGKCTNCTRIASHNHPDVHLLEPDGASIKIDQV-RALKQELSKRGME-SDQKVVIIYDAEKMTVQSANSLLKFIEEPEGGLLLLFLTTNPGQILPTIQSRLQPVTFKSLTFDSLLASLTAA----GI--S-EQKARIYASITGSVEEAKAFEESEWFS--------------------EARNVVIKLYEGIHHQGTSPLIIIQESWMPLFK-EKDKMALGLELLLLLYRDRLHLTLDENYEPICTAQKEMLGQDALRKSLSETTGEIEKILAAKSKLDSNMNTQLLMEQLVLEIQGR |
| 1SXJ Chain:C ((22-329)) | -ETLDE-VYGQNEVITTVRKFVDEGKLPH-LLFYGPPGTGKTSTIVALAREIYGKNYS--------------------NMVLELNASD-DRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSQCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYT---LNKVRSAKGLALIDLIEGIVKILEDYE------------------------LQNEETRVHLLTKLADIEYSISKGGNDQIQGSAVIGAIKA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134283 for 1999 contacts (-67.2/contact) +
2D Compatibility (PS) -30571 + (NN) -17093 + (LL) 3500
1D Compatibility (HY) -10400 + (ID) 2550
Total energy: -191397.0 ( -95.75 by residue)
QMean score : 0.527
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