Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIANSITDLIGKTPIVKLNRLPE----AGSADVYVKLEFQNPGGSVKDRIANAMIESAEKSGALKPGDTIIEPTSGNTGIGLAMVAAAKGYQAIFVMPETMSLERRKLLQAYGAKLVLTPGPDGMKGAIAKAEELAKEN--NYFVPQQFHNPANPAVHEETTGPEIVEAFGKDG-LDAFIAGVGTGGTVTGVGHVLKKNYPDVKIYALEPEESPVLSGGSPSPHKIQGIGAGFVPDTLDTKVYDGILKVSSEDALETAREVAKKEGILVGISSGATIKAALDLA-KELGAGKKVLAIVASNGERYLSTPLYNFED |
| 3BM5 Chain:B ((12-322)) | --IYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKPGMEIIESTSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHYTAN-EIWE--DTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEGKAKGPHGIQGIGAGFIPDIYKKEFVDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAILAGLKEAEKPENEGKTIVIIVPSCGERYLSTDLYKIKD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3BM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -97371 for 2848 contacts (-34.2/contact) +
2D Compatibility (PS) -33417 + (NN) -14066 + (LL) 396
1D Compatibility (HY) -28400 + (ID) 7400
Total energy: -180258.0 ( -63.29 by residue)
QMean score : 0.548
|
|
|