Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLKKWKRDHLGMVMGILNVTPDSFSDGGKYMQVEEAVARALQMAEDGAAIIDVGGISTRPGFSEVTPDEELARIIPVIKAVRTKLPDIWISVDSWRAEVAEQAILAGADMINDQWGAKKEPKIAEVAAKYDVPICLMHNREN-------AQYDNFLEDVKKDLLESIAIAKAASVPDEHIILDPGFGFVKTPAQNLEVLRRIDEIVALGYEVLLGTSRKSTIGLVLGTTPGDRMEGTGATTVYGFSKGCTITRVHDVLPIARMVRMTDAITGKLDITNL
1AJ2 Chain:A ((17-271))-----------VMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF-EVWISVDTSKPEVIRESAKVGAHIIND-IRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGMSRKSMIGQLLNVGPSERLSGSLACAVIAAMQGAHIIRVHDVKETVEAMRVVEA----------


General information:
TITO was launched using:
RESULT:

Template: 1AJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138793 for 2058 contacts (-67.4/contact) +
2D Compatibility (PS) -27767 + (NN) -19880 + (LL) 1384
1D Compatibility (HY) -18800 + (ID) 5450
Total energy: -209306.0 ( -101.70 by residue)
QMean score : 0.592

(partial model without unconserved sides chains):
PDB file : Tito_1AJ2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1AJ2-query.scw
PDB file : Tito_Scwrl_1AJ2.pdb: