Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LAQLSLEHIYKIYDNKVTAVSDFNLEIDDKEFIVFVGPSGCGKSTTLRMIAGLEEISKGELSIDG-KVMNNVAPKD--RDIAMVFQNYALYPHMTVYDNMAFG-LKLRKMPKDEIKKRVEHAANILGLTEYLKRKPSALSGGQRQRVALGRAIVRDAKVFLMDEPLSNLDAKLRVQMRAEITKLHQQL---DTTMIYVTHDQTEAMTMATRIVIMKDGVIQQVGSPKQVYDHPVNMFVAGFIGSPAMNFFKGRLEGSNFIGDDFTIEVPEGKLKLLKDRGFDGKNIVFGIRPEDIHDEPIVIEANPGYTFKATTIVAELTGAEFMLHSRVGTHEFVARVDARSEHQPNEVLTLAFEMSKSHFFDPETEDNLTD |
| 4U00 Chain:A ((5-229)) | ---IRIRNLHKWF-GPLHVLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLEDFQEGEVVVDGLSVKDDRALREIRREVGMVFQQFNLFPHMTVLENVTLAPMRVRRWPREKAEKKALELLERVGILDQARKYPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDP----EMVGEVLDVMRDLAQGGMTMVVVTHEMGFAREVADRVVFMDGGQIVEEGRPEEIFTRP-------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4U00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -137989 for 1760 contacts (-78.4/contact) +
2D Compatibility (PS) -23747 + (NN) -7991 + (LL) 9084
1D Compatibility (HY) -18800 + (ID) 3850
Total energy: -183293.0 ( -104.14 by residue)
QMean score : 0.545
|
|
|