Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MISIVLVSHSQKITEGLQEMIVEMVGDTVHIISSGGTGDGRLGTNAIMIADNIATCTNSEHIYIFCDIGSAILSAETALELLDTDLLEKTTIIDAPLVEGAFTAAVQSLVNPSKEAILQELTNVH
2KPO Chain:A ((1-110))
MLLYVLIISNDKKLIEEARKMAEKANLELRTVKT---------EDELKKYLEEFRKESQNIKVLILVSNDEELDKAKELAQKMEIDVRTRK-------VTSPDEAKRWIKEFSEEGGSLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2KPO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64603 for 801 contacts (-80.7/contact) +
2D Compatibility (PS) -11714 + (NN) -415 + (LL) 100
1D Compatibility (HY) 400 + (ID) 550
Total energy: -76782.0 ( -95.86 by residue)
QMean score : 0.343
(partial model without unconserved sides chains):
PDB file :
Tito_2KPO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KPO-query.scw
PDB file :
Tito_Scwrl_2KPO.pdb
: