Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDYVITTELPSAEEFVQLRVDAGLSFRAIEASRKALLKSVYFVGLRSKENGKLIGMGRLVGDGIMFIVSDIAVFPSFQGKGFGKVIMTHIKDYIEANLDKTACVTLLADVPAHGLYKQFGFRESAPASI-----GMIYQVGN
1Q2Y Chain:A ((1-140))
MKAVIAKNEEQLKDAFYVREEVFVKEQNVPAEEEIDELENESEHIVVYDGEKPVGAGRWRMKDGYGKLERICVLKSHRSAGVGGIIMKALEKAAADGGASG--FILNAQTQAVPFYKKHGYRVLSEKEFLDAGIPHLQMMKD
General information:
TITO was launched using:
RESULT:
Template:
1Q2Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75362 for 1015 contacts (-74.2/contact) +
2D Compatibility (PS) -14088 + (NN) -2015 + (LL) 200
1D Compatibility (HY) -800 + (ID) 1150
Total energy: -93215.0 ( -91.84 by residue)
QMean score : 0.334
(partial model without unconserved sides chains):
PDB file :
Tito_1Q2Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q2Y-query.scw
PDB file :
Tito_Scwrl_1Q2Y.pdb
: