Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MQIKELAELTGVSVRTLHHYDKIGLLVPQKDDWNGYRIYSEKDVDKLQQILFFKELDFPLKKIQQILDDPLFDKNVALDMQRHLLIEKKQRIETMLATLDLTIKNEKGEITMTNKEKFTGFDFSSNPYEEEARKLWGDKVVEKANEKVNNMSEKEQLTLKESFDAEFRHLASVRKLTPESEEAQLEIDHFFHYLNDTHGNIYSLEAFASLGEMYVNDERFTKNIDQFGDGLSQFLQEAMTIYAKNK
1JBG Chain:A ((2-107))
KYQVKQVAEISGVSIRTLHHYDNIELLNPSALTDAGYRLYSDADLERLQQILFFKEIGFRLDEIKEMLDHPNFDRKAALQSQKEILMKKKQRMDEMIQTIDRTLLS---------------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1JBG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43494 for 614 contacts (-70.8/contact) +
2D Compatibility (PS) -11861 + (NN) -10803 + (LL) 9472
1D Compatibility (HY) -12000 + (ID) 2650
Total energy: -71336.0 ( -116.18 by residue)
QMean score : 0.684
(partial model without unconserved sides chains):
PDB file :
Tito_1JBG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JBG-query.scw
PDB file :
Tito_Scwrl_1JBG.pdb
: