Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAYSFKLPDIGEGIHEGEIVKWFVQPGDKIEEDESLFEVQNDKSVEEITSPVSGTIKEIKVAEGTVATVGQVLVTFDGVEGHEDDAEEESAAPKAESTESTPAPAQASGKGIFEFKLPDIGEGIHEGEIVKWFIQPGDKVEEDQSIFEVQNDKSVEEITSPVDGTVKDILVSEGTVATVGQVLVTFEGDFEGEASHESTPESPAEDAALANNDATSAPATGGNGTPSSKKDPNGLVIAMPSVRKYAREKGVNIAEVAGSGKNNRVVKADIDAFLNGEQPAAATTTAQTEEKAAAPKAEKAAGKQPVASSDAYPETREKLTPTRRAIAKAMVNSKHTAPHVTLMDEIEVTALMAHRKRFKEVAAEK-GIKLTFLPYMVKALVATLRDFPVLNTTLDDATEELVYKHYFNVG--IAADTDHGLYVPVIKNADKKSVFQISDEINELAGKARDGKLTADEMRH-GSATISNIGSAGGQWFTPVINYPE---VAILGVGRIAQKPIVKDGEIVAAPVLALSLSFDHRVIDGATAQKAMNNIKRLLNDPELLLMEV |
| 1B5S Chain:A ((184-425)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAKPATTEGEFPETRE-KMS-GIRRAIAKAMVHSKHTAPHVTLMDEADVTKLVAHRKKFKAIAAE-KGIKLTFLPYVVKALVSALREYPVLNTSIDDETEEIIQKHYYNIGIAADTDR--GLLVPVIKHADRKPIFALAQEINELAEKARDGKLTPGEMK-GASCTITNIGSAGGQWFTPVI--NHPEV-AILGIGRIAEKPIVRDGEIVAAPMLALSLSFDHRMIDGATAQKALNHIKRLLSDPELLLM-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122157 for 1646 contacts (-74.2/contact) +
2D Compatibility (PS) -25663 + (NN) -9574 + (LL) 16668
1D Compatibility (HY) -26000 + (ID) 8200
Total energy: -174926.0 ( -106.27 by residue)
QMean score : 0.534
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