Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKFAQKTIYQVYPKSFYDTTGDGTGDIPGITAKLDYLQKLGIEMIWLNPFYPSPQNDNGYDIADYTAVDPLFGTMDDVTTLIKEAKKRNIGIMIDLVLNHTSTEHPWFKKALAG--DPFYRDFYYFRPAK---ADGS--PPTNWVSKFGGNAWEKLPDSSEYYLHLYDVTQADLDWANPNVREALF-AVVNFWIDKGVEGFRLDVLNVIAKPKFLEDDFEGDGRR-------FYTDGPGIHAYLKELHE----RTFGDKPIITVGEMSSTDIDNCIRYSNPDEKELSMVFHFHHLKVDYPDGEKWRLADVNFENLKSIFHTWQVAMSD-------ENGWDALFWNNHDQPRALGRFASDKPEHYYHSATLLGATIHFMRGTPFVYMGEEIGMMNPKFPTIDDYVDVETLNHFD-ILQKNGLSEQEV---MEIIKERSRDNSRTPMQWDDSQ-NAGFT--TGTPWLKVADNANE-INVQTALSNKTSIFYFYQKLIALRKEHPVIQTGDYTPYLTEEDS--IIAYKRSNETTSLLSIHHFGSEKKKIQLPTEFLNAEVLLSNYERQRI-SSELELAPYETLTLIQ |
| 3A4A Chain:A ((15-587)) | ---WKEATFYQIYPASFKDSNDDGWGDMKGIASKLEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDLVINHCSSEHEWFKESRSSKTNP-KRDWFFWRPPKGYDAEGKPIPPNNWKSYFGGSAWTFDEKTQEFYLRLFCSTQPDLNWENEDCRKAIYESAVGYWLDHGVDGFRIDVGSLYSKVVGLPDAPVVDKNSTWQSSDPYTLNGPRIHEFHQEMNQFIRNRVKDGREIMTVGEMQHASDETKRLYTSASRHELSELFNFSHTDVGTSPLFRYNL--VPFE-----LKDWKIALAELFRYINGTDCWSTIYLENHDQPRSITRFGDDSPKNRVISGKLLSVLLSALTGTLYVYQGQELGQINFKNWPVEKYEDVEIRNNYNAIKEEHGENSEEMKKFLEAIALISRDHARTPMQWSREEPNAGFSGPSAKPWFYLNDSFREGINVEDEIKDPNSVLNFWKEALKFRKAHKDITVYGYDFEFIDLDNKKLFSFTKKYNNKTLFAALNFSSDATDFKIPNDDSSFKLEFGNYPKKEVDASSRTLKPWEGRIYI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186435 for 4609 contacts (-40.5/contact) +
2D Compatibility (PS) -57554 + (NN) -31849 + (LL) 980
1D Compatibility (HY) -38800 + (ID) 9750
Total energy: -323408.0 ( -70.17 by residue)
QMean score : 0.486
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