Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKSVNVIGAGLAGSEAVWQLVNRGVKVDLYEMRP--VKQTPAHHTDKFAELVC----TNSLRANGLTNAVGVIKEEMRMLDSII--IEAADKASVPAGGALAVDRHEFSGYITDKVKNHPLVTVHTEEVTTIPEGPTIIATGPLTSPALADEIKQLTGEEYLYFYDAAAPIIEKDSIDMDKVYLKSRYDKGEAAYLNCPMSEEEFNAFYEALVTAETAALKEFEKEVFFEGCMPIEVMAKRGIKTMLFGPLKPVGLEDPKTGKRPYAVLQLRQDDAAGTLYNMVGFQTHLKWGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAGQMTGVE--GYVESAASGLAAGINAANFIQEKELVVFPTETAIGSLAHYITSASKKSFQPMNVNFGLFPELETKIRAKQERNEKLAERALNAIKKVAEEL |
| 4J33 Chain:A ((22-411)) | MSESVAIIGAGLVGCLAALAFSKEGYNVTLYDFRQDPRLDTTKNKNLKSINLAISARGIDALKSIDPDACEHILQDMIPMKGRMIHDLKGRQESQLYGEAINSINRSVLNNSLLDELEKSTTELKFGHKLVKIE-----WTDDKQICHFAIGTPHTEKYD-FVIGCDGAYSATRSQMQRKVEMDFSQEYMNLRYIELYIPPTEEFKPNYGGNF-AIAPDHLHIWPRHKFMLIALA---NSDGSFTSTFFGSKDQISDL-ITSKSRVREFLIENFPDI-------------------------INIMDLDDAVKRFITYPKESLVCVNCKPYDVP---GGKAILLGDAAHAMVPFYGQGMNCGFEDVRILMALLKKHS----------GDRSRAFTEYTQTRHKDLVSITELAKRNYKEMSHDVTSKRFLLRK------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73085 for 3071 contacts (-23.8/contact) +
2D Compatibility (PS) -37787 + (NN) 8089 + (LL) 5364
1D Compatibility (HY) -7200 + (ID) 2350
Total energy: -106969.0 ( -34.83 by residue)
QMean score : 0.224
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