Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQGGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNFTVLLDVEGKQQLVFKHAISTFSPQKNVALNPDAE
4J6W Chain:D ((5-69))
-----HSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLK-NTVSQMVYKHAISTVVPSRPVR------
General information:
TITO was launched using:
RESULT:
Template:
4J6W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41258 for 392 contacts (-105.2/contact) +
2D Compatibility (PS) -7089 + (NN) -2450 + (LL) 368
1D Compatibility (HY) -7600 + (ID) 1550
Total energy: -59579.0 ( -151.99 by residue)
QMean score : 0.682
(partial model without unconserved sides chains):
PDB file :
Tito_4J6W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J6W-query.scw
PDB file :
Tito_Scwrl_4J6W.pdb
: