Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEKYVVIGNPIRHSLSPAMQNRIFQELGMNAEYNSV-LIEEDAFETEIKKLMDS----GVRGFNITTPFKERILPFLDELDNLAAASGAVNTV-LKKEDKWYGFNTDGKGYLEGLEEIRSITEDDSILITGAGGASKAIYLALSTHTDAKITVANRTTEKAIEMTKDNNN---HHAITLEEA---EKQLADFTIIIQTTSIGLEASKNKSPISLANVKQGTICSDIIYNPAETAFLKEAKKNGAITQNGLPMFVNQGALAFEIWTGIKPERSLMKEAVLEQLGGN |
| 3JYP Chain:A ((9-281)) | -----LIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYLGFNGLNITHPYKQAVLPLLDEVSEQATQLGAVNTVVIDATGHTTGHNTDVSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTA-FDVSCLTKDHWVGDVVYMPIETELLKAARALGCETLDGTRMAIHQAVDAFRLFTGLEPDVSRMRETFL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105167 for 2236 contacts (-47.0/contact) +
2D Compatibility (PS) -27854 + (NN) -9259 + (LL) 464
1D Compatibility (HY) -12800 + (ID) 4300
Total energy: -158916.0 ( -71.07 by residue)
QMean score : 0.460
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